sync: Major UI updates from private repo (Jan 16-24)

Features synced:
- UI Panels Refactor: flexible pane system with ChatPane, NodePane,
  DimensionsPane, WorkflowsPane, ViewsPane, MapPane
- Source Content Reader: content type detection + 4 formatters
  (transcript, book, markdown, raw)
- Source Content Search: Cmd+F search in Source Reader
- Feed Layout Overhaul: LeftToolbar, SplitHandle, CollapsedRail
- Map Panel: promoted to first-class pane
- Edge policy simplification: auto-inference + direction correction

New files:
- src/components/panes/* (pane system)
- src/components/layout/CollapsedRail.tsx
- src/components/layout/LeftToolbar.tsx
- src/components/layout/SplitHandle.tsx
- src/components/focus/source/* (Source Reader + formatters)
- src/components/views/ViewsOverlay.tsx

Updated:
- ThreePanelLayout.tsx (complete refactor)
- FocusPanel.tsx (Source tab integration)
- API routes (dimensions GET, edges auto-inference)
- Database services (nodes, edges, dimensions)

Dependencies added:
- react-markdown
- remark-gfm

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

src/components/agents/QuickAddInput.tsx

@@ -12,16 +12,26 @@ interface QuickAddSubmitPayload {
 interface QuickAddInputProps {
   activeDelegations: AgentDelegation[];
   onSubmit: (payload: QuickAddSubmitPayload) => Promise<void>;
+  // External control (optional - if provided, component is controlled)
+  isOpen?: boolean;
+  onClose?: () => void;
 }
 
-export default function QuickAddInput({ activeDelegations, onSubmit }: QuickAddInputProps) {
+export default function QuickAddInput({ activeDelegations, onSubmit, isOpen, onClose }: QuickAddInputProps) {
   const [input, setInput] = useState('');
   const [isPosting, setIsPosting] = useState(false);
-  const [isExpanded, setIsExpanded] = useState(false);
+  const [isExpandedInternal, setIsExpandedInternal] = useState(false);
   const [dragOver, setDragOver] = useState(false);
   const [uploadedFile, setUploadedFile] = useState<File | null>(null);
   const [uploadError, setUploadError] = useState<string | null>(null);
 
+  // Support both controlled (isOpen/onClose) and uncontrolled (internal state) modes
+  const isControlled = isOpen !== undefined;
+  const isExpanded = isControlled ? isOpen : isExpandedInternal;
+  const setIsExpanded = isControlled
+    ? (value: boolean) => { if (!value && onClose) onClose(); }
+    : setIsExpandedInternal;
+
   const maxConcurrent = 5;
   const activeCount = activeDelegations.filter(
     (d) => d.status === 'queued' || d.status === 'in_progress'
@@ -149,8 +159,12 @@ export default function QuickAddInput({ activeDelegations, onSubmit }: QuickAddI
 
   const hasContent = input.trim() || uploadedFile;
 
-  // Collapsed state - prominent "ADD STUFF" button
+  // Collapsed state - only show button if NOT controlled externally
   if (!isExpanded) {
+    // In controlled mode, don't render anything when closed
+    if (isControlled) return null;
+
+    // Uncontrolled mode - show the "ADD STUFF" button
     return (
       <button
         onClick={() => setIsExpanded(true)}
@@ -201,14 +215,10 @@ export default function QuickAddInput({ activeDelegations, onSubmit }: QuickAddI
     );
   }
 
-  // Expanded state - full width overlay
-  return (
+  // Expanded state - modal overlay (centered if controlled, absolute if uncontrolled)
+  const modalContent = (
     <div
       style={{
-        position: 'absolute',
-        top: '60px',
-        left: '20px',
-        right: '20px',
         display: 'flex',
         flexDirection: 'column',
         gap: '12px',
@@ -216,13 +226,15 @@ export default function QuickAddInput({ activeDelegations, onSubmit }: QuickAddI
         padding: '16px',
         borderRadius: '12px',
         border: dragOver ? '1px solid #22c55e' : '1px solid #2a2a2a',
-        zIndex: 100,
         animation: 'fadeIn 150ms ease-out',
-        transition: 'border-color 0.15s ease'
+        transition: 'border-color 0.15s ease',
+        width: isControlled ? '500px' : 'auto',
+        maxWidth: isControlled ? '90vw' : 'none',
       }}
       onDragOver={handleDragOver}
       onDragLeave={handleDragLeave}
       onDrop={handleDrop}
+      onClick={(e) => e.stopPropagation()}
     >
       {/* Header */}
       <div style={{
@@ -534,4 +546,37 @@ export default function QuickAddInput({ activeDelegations, onSubmit }: QuickAddI
       `}</style>
     </div>
   );
+
+  // In controlled mode, wrap with backdrop
+  if (isControlled) {
+    return (
+      <div
+        style={{
+          position: 'fixed',
+          inset: 0,
+          background: 'rgba(0, 0, 0, 0.6)',
+          display: 'flex',
+          alignItems: 'center',
+          justifyContent: 'center',
+          zIndex: 1000,
+        }}
+        onClick={() => setIsExpanded(false)}
+      >
+        {modalContent}
+      </div>
+    );
+  }
+
+  // Uncontrolled mode - render with absolute positioning
+  return (
+    <div style={{
+      position: 'absolute',
+      top: '60px',
+      left: '20px',
+      right: '20px',
+      zIndex: 100,
+    }}>
+      {modalContent}
+    </div>
+  );
 }

src/components/agents/RAHChat.tsx

@@ -22,10 +22,17 @@ const createVoiceRequestId = () =>
     ? crypto.randomUUID()
     : `voice_${Date.now()}_${Math.random().toString(36).slice(2, 8)}`;
 
+interface HighlightedPassage {
+  selectedText: string;
+  nodeId: number;
+  nodeTitle: string;
+}
+
 interface RAHChatProps {
   openTabsData: Node[];
   activeTabId: number | null;
   activeDimension?: string | null;
+  onClearDimension?: () => void;
   onNodeClick?: (nodeId: number) => void;
   delegations?: AgentDelegation[];
   messages?: ChatMessage[];
@@ -33,12 +40,16 @@ interface RAHChatProps {
   mode?: 'easy' | 'hard';
   delegationMode?: boolean;
   delegationSessionId?: string;
+  onQuickAdd?: () => void;
+  highlightedPassage?: HighlightedPassage | null;
+  onClearPassage?: () => void;
 }
 
 export default function RAHChat({
   openTabsData,
   activeTabId,
   activeDimension,
+  onClearDimension: _onClearDimension,
   onNodeClick,
   delegations = [],
   messages: externalMessages,
@@ -46,6 +57,9 @@ export default function RAHChat({
   mode = 'easy',
   delegationMode = false,
   delegationSessionId,
+  onQuickAdd: _onQuickAdd,
+  highlightedPassage: _highlightedPassage,
+  onClearPassage: _onClearPassage,
 }: RAHChatProps) {
   // Use external state if provided (lifted state), otherwise use local state
   const [internalMessages, internalSetMessages] = useState<ChatMessage[]>([]);