feat: final schema pass — sync 9 schema changes from main repo

- Rename nodes.content → nodes.notes across all services, tools, API routes, and UI
- Add dimensions.icon column support (GET/POST routes, types)
- Add nodes.event_date column (create/update flows, types)
- Drop nodes.type and nodes.is_pinned references
- Drop edges.user_feedback references
- Drop chat_memory_state table (replaced with DROP IF EXISTS in migration)
- Update schema guide files (system/schema.md)
- Add runtime migration block in sqlite-client.ts for existing databases
- Fix MCP tool schemas (external API keeps 'content' param, maps to 'notes' internally)
- Update standalone MCP server (nodeService.js, sqlite-client.js, index.js)
- Update HTTP MCP server (server.js, stdio-server.js)
- Update all extraction tools (paper, website, youtube)
- Update all UI components (FocusPanel, ThreePanelLayout, GridView, ListView, FolderViewOverlay)
- TypeScript: 0 errors

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

app/api/dimensions/route.ts

@@ -19,6 +19,7 @@ export async function GET() {
       SELECT
         d.name AS dimension,
         d.description,
+        d.icon,
         d.is_priority AS isPriority,
         COALESCE(dc.count, 0) AS count
       FROM dimensions d
@@ -31,6 +32,7 @@ export async function GET() {
       data: result.rows.map((row: any) => ({
         dimension: row.dimension,
         description: row.description,
+        icon: row.icon || null,
         isPriority: Boolean(row.isPriority),
         count: Number(row.count)
       }))
@@ -49,6 +51,7 @@ export async function POST(request: NextRequest) {
     const body = await request.json();
     const rawName = typeof body?.name === 'string' ? body.name.trim() : '';
     const description = typeof body?.description === 'string' ? body.description.trim() : null;
+    const icon = typeof body?.icon === 'string' ? body.icon.trim() : null;
     const isPriority = typeof body?.isPriority === 'boolean' ? body.isPriority : false;
     
     if (!rawName) {
@@ -67,14 +70,15 @@ export async function POST(request: NextRequest) {
 
     const sqlite = getSQLiteClient();
     const result = sqlite.query(`
-      INSERT INTO dimensions(name, description, is_priority, updated_at)
-      VALUES (?, ?, ?, CURRENT_TIMESTAMP)
-      ON CONFLICT(name) DO UPDATE SET 
+      INSERT INTO dimensions(name, description, icon, is_priority, updated_at)
+      VALUES (?, ?, ?, ?, CURRENT_TIMESTAMP)
+      ON CONFLICT(name) DO UPDATE SET
         description = COALESCE(?, description),
+        icon = COALESCE(?, icon),
         is_priority = COALESCE(?, is_priority),
         updated_at = CURRENT_TIMESTAMP
-      RETURNING name, description, is_priority
-    `, [rawName, description, isPriority ? 1 : 0, description, isPriority ? 1 : 0]);
+      RETURNING name, description, icon, is_priority
+    `, [rawName, description, icon, isPriority ? 1 : 0, description, icon, isPriority ? 1 : 0]);
 
     if (result.rows.length === 0) {
       throw new Error('Failed to create dimension');

app/api/mcp/route.ts

@@ -134,7 +134,7 @@ function createRAHServer(): McpServer {
               id: node.id,
               title: node.title,
               description: node.description ?? null,
-              content: node.content ?? null,
+              notes: node.notes ?? null,
               link: node.link ?? null,
               dimensions: node.dimensions || [],
               metadata: node.metadata || {},

app/api/nodes/[id]/regenerate-description/route.ts

@@ -85,10 +85,10 @@ export async function POST(
     // Generate new description using the description service
     const newDescription = await generateDescription({
       title: node.title,
-      content: node.content || undefined,
+      notes: node.notes || undefined,
       link: node.link || undefined,
       metadata: enrichedMetadata,
-      type: enrichedMetadata?.type,
+      
       dimensions: node.dimensions || []
     });
 

app/api/nodes/[id]/route.ts

@@ -68,16 +68,11 @@ export async function PUT(
       }, { status: 404 });
     }
 
-    if (body && Object.prototype.hasOwnProperty.call(body, 'is_pinned')) {
-      console.warn(`[nodes/${nodeId}] Ignoring legacy is_pinned payload`);
-      delete body.is_pinned;
-    }
-
     const updates: Record<string, unknown> = { ...body };
     let shouldQueueEmbed = false;
 
     const incomingChunk = typeof body.chunk === 'string' ? body.chunk : undefined;
-    const incomingContent = typeof body.content === 'string' ? body.content : undefined;
+    const incomingNotes = typeof body.notes === 'string' ? body.notes : undefined;
     const existingChunk = existingNode.chunk ?? '';
 
     if (incomingChunk !== undefined) {
@@ -92,8 +87,8 @@ export async function PUT(
       } else {
         delete updates.chunk_status;
       }
-    } else if (!existingChunk.trim() && hasSufficientContent(incomingContent)) {
-      updates.chunk = incomingContent;
+    } else if (!existingChunk.trim() && hasSufficientContent(incomingNotes)) {
+      updates.chunk = incomingNotes;
       updates.chunk_status = 'not_chunked';
       shouldQueueEmbed = true;
     }

app/api/nodes/route.ts

@@ -60,7 +60,7 @@ export async function POST(request: NextRequest) {
       }, { status: 400 });
     }
 
-    const rawContent = typeof body.content === 'string' ? body.content : null;
+    const rawNotes = typeof body.notes === 'string' ? body.notes : null;
 
     // Process provided dimensions first (needed for description generation)
     const providedDimensions = Array.isArray(body.dimensions) ? body.dimensions : [];
@@ -74,10 +74,9 @@ export async function POST(request: NextRequest) {
     try {
       nodeDescription = await generateDescription({
         title: body.title,
-        content: rawContent || undefined,
+        notes: rawNotes || undefined,
         link: body.link || undefined,
         metadata: body.metadata,
-        type: body.type,
         dimensions: trimmedProvidedDimensions
       });
     } catch (error) {
@@ -88,7 +87,7 @@ export async function POST(request: NextRequest) {
     // Auto-assign locked dimensions + keyword dimensions for all new nodes
     const { locked, keywords } = await DimensionService.assignDimensions({
       title: body.title,
-      content: rawContent || undefined,
+      notes: rawNotes || undefined,
       link: body.link,
       description: nodeDescription
     });
@@ -107,15 +106,15 @@ export async function POST(request: NextRequest) {
 
     if (chunkToStore && chunkToStore.trim().length > 0) {
       chunkStatus = 'not_chunked';
-    } else if (!chunkToStore && hasSufficientContent(rawContent)) {
-      chunkToStore = rawContent;
+    } else if (!chunkToStore && hasSufficientContent(rawNotes)) {
+      chunkToStore = rawNotes;
       chunkStatus = 'not_chunked';
     }
 
     const node = await nodeService.createNode({
       title: body.title,
       description: nodeDescription,
-      content: rawContent ?? undefined,
+      notes: rawNotes ?? undefined,
       link: body.link,
       dimensions: finalDimensions,
       chunk: chunkToStore ?? undefined,